Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_14305
phage	JP1 MOI 10	-2.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6
phage	P. simiae Grant Run MOI 0.1	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
carbon source	L-Histidine (C)	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1
carbon source	Carbon source L-Citrulline 10 mM	-1.1
carbon source	D-Gluconic Acid (C)	-1.0
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.0
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
carbon source	L-Asparagine (C)	-1.0
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-1.0
stress	Choline chloride 300 mM	-1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.9
carbon source	L-Leucine (C)	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.9
phage	P. simiae ORA MOI 10	-0.9
supernatant control	Vogels_fungal_media; pH 5.5	-0.8
solid stress	80% Methanol 2 mM; solid stress	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
nitrogen source	Adenosine (N)	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
no stress control	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1	+0.8
carbon source	2'-Deoxyinosine 5 mM (C)	+0.8
seeds	Growth on radish seeds for 72 hours	+0.8
		remove PS417_14305