Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_13685
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
phage	JP1 MOI 1	-0.7
carbon source	octanoate (C)	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
stress	R2A with Fusaric 120 ug/mL	-0.6
agar plate interaction control	Taped volatile agar plate with no fungus	-0.6
stress	Phosphomycin 0.003 mg/ml	-0.5
stress	R2A with Fusaric 120 ug/mL	-0.5
carbon source	L-Valine (C)	-0.5
stress	R2A with Fusaric 120 ug/mL	-0.5
phage	P. simiae OR Antrim MOI 10	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.5
solid stress	Fraxetin 2 mM; solid stress	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
carbon source	L-Tryptophan (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6
solid stress	Fraxetin 3 mM; solid stress	+0.6
solid stress	Fraxetin 3 mM; solid stress	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6
solid stress	Fraxetin 3 mM; solid stress	+0.7
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	+0.7
solid stress	Fraxetin 3 mM; solid stress	+0.7
root	root sample 6; outgrowth in LB	+0.8
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9
stress	Neomycin 0.04 mg/ml	+1.3
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