Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_13635
carbon source	D-Fructose (C)	-0.9
carbon source	D-Fructose (C)	-0.6
ecofab	LB in EcoFAB_3.5mL	-0.6
soil	soil sample 7; outgrowth in LB	-0.6
stress	Doxycycline hyclate 0.001 mg/ml	-0.5
seeds	Growth on radish seeds for 72 hours	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
solid stress	80% Methanol 1 mM; solid stress	-0.5
carbon source	D-Mannose (C)	-0.5
carbon source	2-Deoxy-D-Ribose (C)	-0.5
liquid stress	Scopoletin 2 mM; liquid stress	-0.4
liquid stress	80% Methanol 3 mM; liquid stress	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4
carbon source	D-Mannose (C)	-0.4
carbon source	Xylitol (C)	-0.4
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4
soil	soil sample 5; outgrowth in LB	+0.4
seeds	Growth on radish seeds for 72 hours	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5
soil	soil sample 3; outgrowth in LB	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
phage	P. simiae OR Antrim MOI 1	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
		remove PS417_13635