Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_13620
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.6
liquid stress	80% Methanol 2 mM; liquid stress	-2.0
phage	JP1 MOI 10	-1.9
carbon source	Carbon source D-Mannitol 2.5 mM	-1.8
nophagecontrol	Only library	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6
liquid stress	Fraxetin 3 mM; liquid stress	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6
phage	P. simiae ORA MOI 0.1	-1.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.5
liquid stress	Fraxetin 2 mM; liquid stress	-1.4
liquid stress	Scopoletin 3 mM; liquid stress	-1.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.3
carbon source	2'-Deoxyinosine 5 mM (C)	-1.3
solid stress	Fraxetin 0.5 mM; solid stress	-1.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
liquid stress	Fraxetin 2 mM; liquid stress	-1.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.4
stress	Gentamicin 0.008 mg/ml	+1.6
seeds	Growth on radish seeds for 72 hours	+2.1
stress	Neomycin 0.04 mg/ml	+2.3
		remove PS417_13620