Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_13090
soil	soil sample 6; outgrowth in LB	-1.3
carbon source	L-Valine (C)	-1.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.1
carbon source	2'-Deoxyinosine 5 mM (C)	-1.0
carbon source	2'-Deoxyinosine 5 mM (C)	-0.9
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
stress	methylglyoxal 0.032 vol%	-0.8
seeds	Growth on radish seeds for 72 hours	-0.8
phage	Wcs_1	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.8
liquid stress	80% Methanol 3 mM; liquid stress	+0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
carbon source	Carbon source D-Mannitol 5 mM	+0.8
carbon source	Carbon source L-Ornithine 5 mM	+0.8
liquid stress	Scopoletin 3 mM; liquid stress	+0.8
liquid stress	Scopoletin 2 mM; liquid stress	+0.8
phage	P. simiae Grant Run MOI 0.1	+0.8
agar plate interaction control	Taped volatile agar plate with no fungus	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.9
stress	Nalidixic 0.025 mg/ml	+1.0
phage	JP1 MOI 10	+1.3
seeds	Growth on radish seeds for 72 hours	+1.5
		remove PS417_13090