Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12925
agar plate interaction control	Taped volatile agar plate with no fungus	-0.8
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.7
carbon source	2-Deoxy-D-Ribose (C)	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
seeds	Growth on radish seeds for 72 hours	-0.7
motility	inner cut, LB soft agar motility assay	-0.7
seeds	Growth on radish seeds for 72 hours	-0.6
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.6
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
root	root sample 6; outgrowth in LB	-0.6
solid stress	Scopoletin 2 mM; solid stress	-0.5
liquid stress	Fraxetin 2 mM; liquid stress	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	+0.5
carbon source	Carbon source D-Mannitol 10 mM	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.6
stress	methylglyoxal 0.032 vol%	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.6
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	+0.6
soil	soil sample 6; outgrowth in LB	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7
phage	P. simiae OR Antrim MOI 0.1	+0.7
carbon source	L-Valine (C)	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.5
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