Fitness for 1 genes in Pseudomonas simiae WCS417

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Group	Condition	PS417_12735
agar plate interaction control	Taped volatile agar plate with no fungus	-1.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-1.3
no phage control	Time6-nophage	-1.1
solid stress	Fraxetin 2 mM; solid stress	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1
temperature	LB 42C	-1.0
carbon source	L-Glutamine (C)	-1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.9
stress	6-methoxy-2(3H)-benzoxazolone 0.5 mM	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
liquid stress	Scopoletin 3 mM; liquid stress	-0.8
no stress control on plate	growth on LB_noSalt plate	-0.8
temperature	LB 42C	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.8
carbon source	Carbon source D-Mannitol 5 mM	+0.8
carbon source	L-Lactate (C)	+0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	+0.8
carbon source	Carbon source D-Mannitol 2.5 mM	+0.9
stress	methylglyoxal 0.032 vol%	+0.9
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+1.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	+1.0
phage	P. simiae OR Antrim MOI 1	+1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.3
		remove PS417_12735