Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12725
carbon source	Carbon source D-Mannitol 5 mM	-4.9
carbon source	Carbon source D-Mannitol 5 mM	-4.5
carbon source	Carbon source D-Mannitol 10 mM	-4.1
carbon source	D-Mannose (C)	-2.9
carbon source	Carbon source D-Mannitol 10 mM	-2.7
carbon source	Carbon source D-Mannitol 2.5 mM	-2.5
carbon source	D-Mannose (C)	-2.0
carbon source	Carbon source D-Mannitol 2.5 mM	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5
carbon source	Xylitol (C)	-1.3
carbon source	Xylitol (C)	-0.8
carbon source	2'-Deoxyinosine 5 mM (C)	-0.8
phage	JP1 MOI 10	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7
carbon source	D-Xylose (C)	-0.7
carbon source	L-Valine (C)	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.6
carbon source	Carbon source L-Ornithine 5 mM	+0.6
seeds	Growth on radish seeds for 24 hours	+0.6
carbon source	D-Sorbitol (C)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	+0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8
carbon source	D-Sorbitol (C)	+0.8
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+1.0
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.4
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