Fitness for 1 genes in Pseudomonas simiae WCS417

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Group Condition PS417_12690
carbon source Xylitol (C) -5.2
carbon source Carbon source D-Mannitol 5 mM -5.0
carbon source Xylitol (C) -4.3
carbon source Carbon source D-Mannitol 2.5 mM -4.3
carbon source Carbon source D-Mannitol 10 mM -3.4
carbon source Carbon source D-Mannitol 5 mM -3.3
carbon source D-Sorbitol (C) -3.3
carbon source Carbon source D-Mannitol 2.5 mM -3.3
carbon source D-Mannose (C) -3.3
carbon source D-Sorbitol (C) -3.3
carbon source D-Xylose (C) -3.1
carbon source D-Xylose (C) -2.9
carbon source D-Mannose (C) -2.8
carbon source Carbon source D-Mannitol 10 mM -2.5
carbon source D-Fructose (C) -1.9
carbon source D-Fructose (C) -1.8
soil soil sample 4; outgrowth in LB -1.2
root root sample 6; outgrowth in LB -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.7
soil soil sample 6; outgrowth in LB -0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6
carbon source L-Valine (C) +0.6
stress Doxycycline hyclate 0.001 mg/ml +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6
motility inner cut, LB soft agar motility assay +0.6
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4
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PS417_12690