Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12275
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7
phage	P. simiae ORA MOI 0.1	-0.6
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1	-0.5
phage	P. simiae OR Antrim MOI 0.1	-0.5
seeds	Growth on radish seeds for 72 hours	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-0.4
motility	inner cut, LB soft agar motility assay	-0.4
phage	P. simiae OR Antrim MOI 10	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-0.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
carbon source	Carbon source D-Mannitol 10 mM	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4
nitrogen source	Putrescine (N)	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4
carbon source	D-Glucose (C)	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.4
solid stress	Scopoletin 2 mM; solid stress	+0.4
solid stress	80% Methanol 0.5 mM; solid stress	+0.5
agar plate interaction control	Taped volatile agar plate with no fungus	+0.5
carbon source	Carbon source L-Ornithine 10 mM	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5
carbon source	Carbon source L-Citrulline 10 mM	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
stress	Thallium(I) acetate 0.0625 mg/ml	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
soil	soil sample 7; outgrowth in LB	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
		remove PS417_12275