Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12175
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.2
stress	Gentamicin 0.008 mg/ml	-1.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4
soil	soil sample 2; outgrowth in LB	-1.3
phage	P. simiae OR Antrim MOI 1	-1.3
seeds	Growth on radish seeds for 72 hours	-1.3
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
phage	P. simiae OR1 MOI 0.1	-1.0
phage	JP1 MOI 10	-1.0
phage	Wcs_1	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
solid stress	Fraxetin 3 mM; solid stress	-0.8
seeds	Growth on radish seeds for 72 hours	-0.8
carbon source	D-Lactate (C)	-0.8
root	root sample 6; outgrowth in LB	-0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.7
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8
supernatant control	Vogels_fungal_media 0.1X	+0.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.9
liquid stress	Fraxetin 2 mM; liquid stress	+0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.6
		remove PS417_12175