Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12135
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
phage	JP1 MOI 0.1	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
soil	soil sample 4; outgrowth in LB	-0.8
no phage control	Time6-nophage	-0.8
soil	soil sample 7; outgrowth in LB	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
seeds	Growth on radish seeds for 72 hours	-0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7
stress	Cisplatin 0.01 mg/ml	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7
supernatant control	Vogels_fungal_media 0.1X	-0.7
phage	Wcs_1	-0.7
root	root sample 6; outgrowth in LB	-0.7
stress	methylglyoxal 0.032 vol%	-0.7
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
stress	NaCl stress 250 mM	-0.6
seeds	Growth on radish seeds for 72 hours	+0.8
stress	Neomycin 0.04 mg/ml	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.1
stress	Gentamicin 0.008 mg/ml	+1.3
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