Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11195
phage	P. simiae OR1 MOI 0.1	-1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
phage	JP1 MOI 1	-0.6
agar plate interaction control	Taped volatile agar plate with no fungus	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
nophagecontrol	TIme6-nophage	-0.6
phage	JP1 MOI 1	-0.6
liquid stress	80% Methanol 3 mM; liquid stress	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
liquid stress	80% Methanol 2 mM; liquid stress	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
carbon source	L-Citrulline (C)	+0.5
phage	P. simiae Grant Run MOI 10	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.6
soil	soil sample 8; outgrowth in LB	+0.6
liquid stress	Scopoletin 3 mM; liquid stress	+0.7
temperature	LB_noSalt 30C	+0.7
stress	Doxycycline hyclate 0.001 mg/ml	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.3
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