Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11170
carbon source	L-Histidine (C)	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
motility	outer cut, LB soft agar motility assay	-0.5
phage	Wcs_1	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.5
phage	JP1 MOI 10	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
supernatant control	Vogels_fungal_media; pH 5.5	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.4
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5
phage	JP1 MOI 10	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
soil	soil sample 6; outgrowth in LB	+0.6
soil	soil sample 5; outgrowth in LB	+0.8
soil	soil sample 8; outgrowth in LB	+0.8
soil	soil sample 2; outgrowth in LB	+0.9
soil	soil sample 7; outgrowth in LB	+0.9
soil	soil sample 4; outgrowth in LB	+1.0
rhizosphere	rhizosphere sample 8; outgrowth in LB	+1.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	+1.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	+1.3
root	root sample 6; outgrowth in LB	+1.3
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