Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11060
seeds	Growth on radish seeds for 72 hours	-3.1
phage	JP1 MOI 1	-1.9
phage	Wcs_1	-1.6
phage	P. simiae ORA MOI 0.1	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.0
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
phage	P. simiae OR Antrim MOI 0.1	-1.0
stress	R2A with Fusaric 120 ug/mL	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
motility	inner cut, LB soft agar motility assay	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
nophagecontrol	TIme6-nophage	-0.8
liquid stress	Fraxetin 2 mM; liquid stress	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.8
soil	soil sample 8; outgrowth in LB	+0.8
soil	soil sample 3; outgrowth in LB	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB	+0.8
carbon source	2'-Deoxyinosine 5 mM (C)	+0.8
carbon source	L-Valine (C)	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.3
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