Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01050
solid stress	Fraxetin 3 mM; solid stress	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
soil	soil sample 7; outgrowth in LB	-0.4
solid stress	Fraxetin 3 mM; solid stress	-0.3
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.2
carbon source	Gly-Glu (C)	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2
phage	P. simiae Grant Run MOI 10	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.2
liquid stress	80% Methanol 3 mM; liquid stress	+0.3
carbon source	NAG (C)	+0.3
supernatant control	Vogels_fungal_media; pH 5.5	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
seeds	Growth on radish seeds for 24 hours	+0.3
nophagecontrol	Only library	+0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3
phage	P. simiae Grant Run MOI 10	+0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
phage	P. simiae OR Antrim MOI 10	+0.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.3
soil	soil sample 6; outgrowth in LB	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
root	root sample 6; outgrowth in LB	+0.5
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