Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10360
agar plate interaction control	Taped volatile agar plate with no fungus	-1.0
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.6
carbon source	L-Valine (C)	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
liquid stress	Fraxetin 2 mM; liquid stress	-0.5
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
liquid stress	Scopoletin 3 mM; liquid stress	-0.5
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.5
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.5
stress	LB_noSalt with Chloride 1100 mM	-0.5
carbon source	2-Deoxy-D-Ribose (C)	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.4
solid stress	Scopoletin 2 mM; solid stress	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4
seeds	Growth on radish seeds for 72 hours	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1	+0.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.4
ecofab	LB in EcoFAB_3.5mL	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5
phage	P. simiae OR Antrim MOI 10	+0.8
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