Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10080
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
phage	P. simiae OR1 MOI 0.1	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.4
phage	P. simiae ORA MOI 0.1	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
phage	P. simiae Grant Run MOI 10	-0.3
soil	soil sample 3; outgrowth in LB	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3
phage	P. simiae OR Antrim MOI 1	-0.3
phage	P. simiae OR Antrim MOI 0.1	-0.3
root	root sample 6; outgrowth in LB	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
carbon source	L-Leucine (C)	-0.3
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
stress	Neomycin 0.04 mg/ml	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3
phage	Wcs_0.1	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
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