Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10070
carbon source	L-Valine (C)	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.6
soil	soil sample 3; outgrowth in LB	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5
soil	soil sample 8; outgrowth in LB	-0.5
liquid stress	80% Methanol 3 mM; liquid stress	-0.4
solid stress	Scopoletin 3 mM; solid stress	-0.4
soil	soil sample 5; outgrowth in LB	-0.4
carbon source	2'-Deoxyinosine 5 mM (C)	-0.4
soil	soil sample 7; outgrowth in LB	-0.4
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.4
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
no stress control on plate	growth on LB_noSalt plate	+0.4
carbon source	Carbon source D-Mannitol 2.5 mM	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4
stress	1-ethyl-3-methylimidazolium chloride 200 mM	+0.4
stress	L-Lysine 60 mM	+0.4
stress	1-ethyl-3-methylimidazolium acetate 35 mM	+0.4
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
stress	methylglyoxal 0.032 vol%	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
phage	JP1 MOI 0.1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7
seeds	Growth on radish seeds for 72 hours	+1.0
		remove PS417_10070