Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10015
carbon source	RCH2_defined_glucose with MS_media 1x	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.9
phage	P. simiae OR Antrim MOI 1	-1.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.5
seeds	Growth on radish seeds for 72 hours	-1.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-1.4
carbon source	Carbon source L-Citrulline 5 mM	-1.4
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	-1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-1.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.3
carbon source	Carbon source D-Mannitol 2.5 mM	-1.3
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-1.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	-1.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.3
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	-1.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.2
carbon source	L-Valine (C)	+1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.2
carbon source	L-Valine (C)	+1.2
agar plate interaction control	Taped volatile agar plate with no fungus	+1.2
phage	JP1 MOI 1	+1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.3
seeds	Growth on radish seeds for 72 hours	+1.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+2.5
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