Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_00960
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.8
phage	P. simiae Grant Run MOI 0.1	-1.9
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.4
phage	P. simiae Grant Run MOI 10	-1.3
carbon source	D,L-Lactate (C)	-1.3
stress	Gentamicin 0.008 mg/ml	-1.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1
stress	Nalidixic 0.015 mg/ml	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
supernatant control	Vogels_fungal_media 0.1X	-1.0
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.9
seeds	Growth on radish seeds for 72 hours	-0.9
seeds	Growth on radish seeds for 24 hours	-0.9
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.9
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.9
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+1.0
ecofab	LB 0.5x in EcoFAB_3.5mL	+1.0
phage	JP1 MOI 10	+1.0
motility	outer cut, LB soft agar motility assay	+1.0
carbon source	L-Valine (C)	+1.0
ecofab	LB in EcoFAB_3.5mL	+1.0
carbon source	L-Valine (C)	+1.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+4.0
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