Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_00930
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
phage	JP1 MOI 10	-0.6
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6
carbon source	RCH2_defined_glucose with MS_media 1x	-0.5
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
phage	P. simiae OR Antrim MOI 10	-0.5
phage	Wcs_0.1	-0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.4
stress	Spectinomycin 0.4 mg/ml	-0.4
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.4
stress	Nalidixic 0.025 mg/ml	-0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4
carbon source	2'-Deoxyinosine 5 mM (C)	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.4
phage	P. simiae ORA MOI 10	-0.4
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.4
nitrogen source	nitrate (N)	-0.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.4
carbon source	L-Citrulline (C)	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB	+0.4
liquid stress	Scopoletin 3 mM; liquid stress	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
supernatant control	Vogels_fungal_media; pH 5.5	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
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