Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_08805
carbon source	Inosine (C)	-3.9
carbon source	Inosine (C)	-3.5
carbon source	2'-Deoxyinosine 5 mM (C)	-1.9
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.9
carbon source	2'-Deoxyinosine 5 mM (C)	-1.6
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.6
seeds	Growth on radish seeds for 72 hours	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
phage	P. simiae ORA MOI 0.1	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
seeds	Growth on radish seeds for 72 hours	-0.4
phage	JP1 MOI 10	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
carbon source	L-Valine (C)	-0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.4
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.4
motility	outer cut, LB soft agar motility assay	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
carbon source	RCH2_defined_glucose with MS_media 1x	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
phage	JP1 MOI 1	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5
root	root sample 6; outgrowth in LB	+0.5
phage	JP1 MOI 10	+0.5
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