Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_08025
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.3
phage	P. simiae Grant Run MOI 10	-4.5
phage	P. simiae OR Antrim MOI 1	-4.4
carbon source	Carbon source D-Mannitol 2.5 mM	-3.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-3.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-3.4
solid stress	Scopoletin 0.5 mM; solid stress	-3.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.7
soil	soil sample 5; outgrowth in LB	-2.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-2.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.4
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-2.3
phage	P. simiae OR1 MOI 0.1	-2.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-2.2
stress	Dimethyl Sulfoxide 5 vol%	-2.2
solid stress	Scopoletin 3 mM; solid stress	-2.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-2.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.8
soil	soil sample 4; outgrowth in LB	-1.8
liquid stress	Fraxetin 2 mM; liquid stress	-1.6
phage	P. simiae Grant Run MOI 0.1	-1.6
phage	JP1 MOI 1	+1.7
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