Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_07375
root	root sample 6; outgrowth in LB	-1.5
carbon source	2'-Deoxyinosine 5 mM (C)	-1.4
nitrogen source	Uridine (N)	-1.2
soil	soil sample 4; outgrowth in LB	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.8
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.8
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.8
carbon source	Gly-Glu (C)	-0.8
nitrogen source	Cytidine (N)	-0.7
soil	soil sample 8; outgrowth in LB	-0.7
solid stress	Fraxetin 2 mM; solid stress	-0.7
stress	Doxycycline hyclate 0.001 mg/ml	-0.7
nitrogen source	Cytosine (N)	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.7
stress	Gentamicin 0.008 mg/ml	-0.7
nitrogen source	Glycine (N)	-0.7
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.6
nitrogen source	Inosine (N)	-0.6
carbon source	NAG (C)	-0.6
temperature	LB_noSalt 30C	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.9
stress	methylglyoxal 0.032 vol%	+1.1
		remove PS417_07375