Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_07035
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.5
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-1.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.3
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-1.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.2
phage	P. simiae ORA MOI 0.1	-1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
stress	Nalidixic 0.025 mg/ml	-0.9
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.9
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.9
phage	P. simiae OR1 MOI 0.1	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.7
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.7
no stress control	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8
no stress control	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2	+0.9
		remove PS417_07035