Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_07010
soil	soil sample 3; outgrowth in LB	-1.6
agar plate interaction control	Taped volatile agar plate with no fungus	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-1.1
carbon source	L-Asparagine (C)	-1.1
carbon source	2'-Deoxyinosine 5 mM (C)	-1.1
carbon source	L-Citrulline (C)	-1.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.9
carbon source	L-Leucine (C)	-0.9
carbon source	2'-Deoxyinosine 5 mM (C)	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	L-Glutamine (C)	-0.8
carbon source	D-Alanine (C)	-0.8
carbon source	L-Malic (C)	-0.8
phage	P. simiae OR Antrim MOI 0.1	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8
solid stress	Fraxetin 1 mM; solid stress	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8
phage	JP1 MOI 1	+0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
phage	P. simiae OR Antrim MOI 10	+0.9
root	root sample 6; outgrowth in LB	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3
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