Fitness for 1 genes in Pseudomonas simiae WCS417

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Group	Condition	PS417_06835
phage	JP1 MOI 10	-1.6
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-1.4
no stress control on plate	growth on LB_noSalt plate	-1.3
liquid stress	Fraxetin 2 mM; liquid stress	-1.3
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.3
soil	soil sample 5; outgrowth in LB	-1.3
carbon source	2'-Deoxyinosine 5 mM (C)	-1.2
phage	P. simiae OR1 MOI 0.1	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.1
phage	P. simiae Grant Run MOI 0.1	-1.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
soil	soil sample 2; outgrowth in LB	-1.1
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
carbon source	Carbon source D-Mannitol 5 mM	-1.0
stress	Choline Lysine 25 mM	-0.9
stress	Phosphomycin 0.002 mg/ml	-0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.9
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	-0.9
stress	Thallium(I) acetate 0.0625 mg/ml	-0.9
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2	+0.9
carbon source	L-Valine (C)	+1.0
stress	methylglyoxal 0.032 vol%	+1.0
phage	P. simiae Grant Run MOI 10	+1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+2.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+2.5
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