Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions

Group	Condition	PS417_06710
carbon source	L-Tryptophan (C)	-4.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	-3.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.5
carbon source	L-Valine (C)	-2.4
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-2.2
agar plate interaction control	Taped volatile agar plate with no fungus	-2.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.1
phage	Wcs_1	-2.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.8
carbon source	Inosine (C)	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.5
carbon source	D-Sorbitol (C)	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.5
carbon source	Inosine (C)	-1.4
supernatant control	Vogels_fungal_media 0.1X	-1.4
root	root sample 6; outgrowth in LB	-1.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.4
liquid stress	80% Methanol 3 mM; liquid stress	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.3
seeds	Growth on radish seeds for 72 hours	-1.3
solid stress	Fraxetin 3 mM; solid stress	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2
stress	6-methoxy-2(3H)-benzoxazolone 2.5 mM	+1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.2
phage	P. simiae OR Antrim MOI 0.1	+1.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.5
carbon source	D-Glucose (C)	+1.7
		remove PS417_06710