Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_06685
nitrogen source	Adenine (N)	-4.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-4.4
carbon source	2-Deoxy-D-Ribose (C)	-4.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-4.4
solid stress	Fraxetin 2 mM; solid stress	-4.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-3.9
rhizosphere	rhizosphere sample 2; outgrowth in LB	-3.2
phage	P. simiae OR1 MOI 0.1	-3.2
solid stress	80% Methanol 0.5 mM; solid stress	-3.0
phage	Wcs_1	-2.9
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-2.7
seeds	Growth on radish seeds for 72 hours	-2.6
carbon source	Carbon source L-Citrulline 10 mM	-2.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-2.1
liquid stress	80% Methanol 3 mM; liquid stress	-2.0
carbon source	L-Histidine (C)	-1.9
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.9
liquid stress	Fraxetin 2 mM; liquid stress	-1.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.9
solid stress	Fraxetin 1 mM; solid stress	-1.8
nitrogen source	Adenosine (N)	-1.8
carbon source	Carbon source D-Mannitol 2.5 mM	-1.8
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1	-1.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.8
phage	P. simiae OR Antrim MOI 10	+1.8
agar plate interaction control	Taped volatile agar plate with no fungus	+1.9
phage	P. simiae OR Antrim MOI 0.1	+2.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+2.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+2.8
		remove PS417_06685