Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_06665
phage	Wcs_1	-0.8
phage	P. simiae OR1 MOI 0.1	-0.6
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
stress	Doxycycline hyclate 0.001 mg/ml	-0.4
phage	P. simiae ORA MOI 0.1	-0.4
phage	Wcs_0.1	-0.4
stress	Gentamicin 0.008 mg/ml	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
nitrogen source	Adenine (N)	-0.4
phage	P. simiae OR Antrim MOI 0.1	-0.3
soil	soil sample 5; outgrowth in LB	-0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.3
soil	soil sample 8; outgrowth in LB	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3
phage	P. simiae OR Antrim MOI 1	+0.3
stress	Cisplatin 0.01 mg/ml	+0.3
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.3
stress	Phosphomycin 0.003 mg/ml	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4
phage	P. simiae OR Antrim MOI 0.1	+0.4
phage	P. simiae Grant Run MOI 0.1	+0.5
stress	Neomycin 0.04 mg/ml	+0.5
phage	JP1 MOI 0.1	+0.7
agar plate interaction control	Taped volatile agar plate with no fungus	+0.7
		remove PS417_06665