Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_06395
phage	P. simiae Grant Run MOI 10	-2.0
stress	Chloramphenicol 0.015 mg/ml	-1.8
stress	Tetracycline 0.001 mg/ml	-1.3
seeds	Growth on radish seeds for 72 hours	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
stress	Nalidixic 0.025 mg/ml	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.1
phage	P. simiae OR1 MOI 0.1	-1.1
stress	NaCl stress 250 mM	-1.0
carbon source	acetate (C)	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.0
stress	Phosphomycin 0.002 mg/ml	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.9
liquid stress	Fraxetin 3 mM; liquid stress	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+1.0
phage	JP1 MOI 10	+1.0
solid stress	Fraxetin 2 mM; solid stress	+1.0
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.1
solid stress	80% Methanol 1 mM; solid stress	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2
root	root sample 6; outgrowth in LB	+1.2
solid stress	80% Methanol 2 mM; solid stress	+1.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+1.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.6
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