Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_06245
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-5.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.4
rhizosphere	rhizosphere sample 1; outgrowth in LB	-4.2
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-4.0
supernatant control	Vogels_fungal_media 0.1X	-4.0
stress	Phosphomycin 0.003 mg/ml	-3.9
agar plate interaction control	Taped volatile agar plate with no fungus	-3.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.6
stress	Polymyxin B sulfate 0.006 mg/ml	-3.3
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2	-3.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-3.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-3.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-3.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-3.1
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-3.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.1
phage	P. simiae ORA MOI 0.1	-3.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-3.1
stress	Cisplatin 0.01 mg/ml	-3.0
soil	soil sample 2; outgrowth in LB	-3.0
phage	P. simiae Grant Run MOI 10	-2.9
phage	P. simiae OR Antrim MOI 10	-2.8
phage	P. simiae OR Antrim MOI 0.1	-2.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+2.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+2.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+3.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+3.3
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