Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_06175
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.0
carbon source	L-Alanine (C)	-1.8
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-1.2
carbon source	L-Alanine (C)	-1.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
soil	soil sample 2; outgrowth in LB	-1.0
phage	P. simiae OR Antrim MOI 1	-0.9
stress	methylglyoxal 0.032 vol%	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9
soil	soil sample 5; outgrowth in LB	-0.9
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	-0.9
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.8
carbon source	2'-Deoxyinosine 5 mM (C)	-0.8
soil	soil sample 6; outgrowth in LB	-0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.8
carbon source	D-Mannose (C)	-0.8
soil	soil sample 7; outgrowth in LB	-0.8
carbon source	D-Mannose (C)	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.9
stress	Phosphomycin 0.001 mg/ml	+1.1
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