Fitness for 1 genes in Pseudomonas simiae WCS417

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PS417_05960
phage P. simiae Grant Run MOI 0.1 -1.1
phage P. simiae Grant Run MOI 0.1 -1.0
phage P. simiae OR Antrim MOI 0.1 -0.9
phage P. simiae OR Antrim MOI 0.1 -0.9
soil soil sample 4; outgrowth in LB -0.8
phage P. simiae OR Antrim MOI 1 -0.8
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8
soil soil sample 5; outgrowth in LB -0.8
liquid stress Fraxetin 2 mM; liquid stress -0.6
agar plate interaction control Taped volatile agar plate with no fungus -0.6
phage P. simiae OR Antrim MOI 10 -0.6
phage P. simiae OR Antrim MOI 1 -0.6
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7
carbon source Carbon source D-Mannitol 10 mM +0.7
carbon source L-Valine (C) +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.6
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PS417_05960