Fitness for 1 genes in Pseudomonas simiae WCS417

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Group Condition PS417_05880
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.0
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7
soil soil sample 4; outgrowth in LB -0.7
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.7
soil soil sample 5; outgrowth in LB -0.7
carbon source Carbon source L-Ornithine 10 mM -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.6
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6
liquid stress Fraxetin 3 mM; liquid stress +0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6
liquid stress Fraxetin 3 mM; liquid stress +0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6
liquid stress Scopoletin 3 mM; liquid stress +0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6
liquid stress Fraxetin 3 mM; liquid stress +0.7
phage JP1 MOI 10 +0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
nitrogen source Adenine (N) +0.9
liquid stress Fraxetin 3 mM; liquid stress +0.9
stress Gentamicin 0.008 mg/ml +1.0
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PS417_05880