Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_05160
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-3.2
soil	soil sample 7; outgrowth in LB	-3.2
soil	soil sample 5; outgrowth in LB	-2.9
motility	outer cut, LB soft agar motility assay	-2.8
phage	JP1 MOI 0.1	-2.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-2.4
phage	P. simiae OR Antrim MOI 10	-2.4
agar plate interaction control	Taped volatile agar plate with no fungus	-1.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.8
solid stress	Fraxetin 2 mM; solid stress	-1.8
carbon source	D-Glucose (C)	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.6
solid stress	80% Methanol 1 mM; solid stress	-1.6
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-1.6
phage	P. simiae ORA MOI 1	-1.5
phage	P. simiae Grant Run MOI 10	-1.5
phage	P. simiae OR Antrim MOI 1	-1.5
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-1.4
phage	P. simiae ORA MOI 0.1	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.4
liquid stress	80% Methanol 0.5 mM; liquid stress	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.4
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1	+1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+2.4
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