Fitness for 1 genes in Agrobacterium fabrum C58

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Group	Condition	Atu5005
nitrogen source	L-Phenylalanine (N)	-0.6
	Atjh2	-0.4
	Atjh2	-0.4
nitrogen source	spermidine (N)	-0.3
carbon source	methyl-beta-D-xylopyranoside (C)	-0.3
carbon source	Methyl beta-D-glucopyranoside (C)	-0.3
carbon source	D-Quinic (C)	-0.3
	Atjh10	-0.3
stress	R2A with nitrite 9 mM	-0.3
nitrogen source	L-Aspartic Acid (N)	-0.2
nitrogen source	NAG (N)	-0.2
carbon source	D-Galacturonic Acid (C)	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2
lb_tobacco_leaf	LB_Tobacco_Leaf	+0.3
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3
pH	R2A pH 5.5	+0.3
stress	Erythromycin 12.5 ug/mL	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3
phage	AgroPhage_E10	+0.3
phage	phage 95.1	+0.3
stress	Chloramphenicol 12.5 ug/mL	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.3
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3
nitrogen source	L-Proline (N)	+0.3
carbon source	succinate (C)	+0.3
phage	phage 99.2	+0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.4
		remove Atu5005