Fitness for 1 genes in Escherichia coli BW25113

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Group Condition b3595
yibJ
stress 3-methyl-1-butanol 2.5 vol% -0.3
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.3
M9 Acetate 0.5% aerobic -0.3
stress LB Anaerobic with Ramoplanin 0.0000625 mM -0.3
carbon source carbon source D-Mannose 1mM -0.3
M9 Acetate 0.5% aerobic -0.3
stress LB Anaerobic with Spiramycin 0.00003125 mM -0.3
stress LB Aerobic with Spectinomycin 0.0000078125 mM -0.2
carbon source carbon source D-Glucose 1mM -0.2
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.2
predation 3 hr rep1_HD100_10fold_dilution -0.2
vitamin M9 with Pyridoxine HCl 20 nM and 4-Deoxypyridoxine 0.25 uM -0.2
phage T7_phage 0.0015625 MOI TC2 -0.2
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan -0.2
M9 Glucose 2% anaerobic -0.2
stress LB Aerobic with Ramoplanin 0.000125 mM -0.2
motility outer cut, LB soft agar motility assay -0.2
phage P2_phage_0.5625_MOI +0.2
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.2
control PBS_cage_2_mice _Feces_16 hr +0.2
control PBS_cage_2_mice _Feces_40 hr +0.2
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.3
phage Phage_N4_cage_4_mouse_2_Cecum_40 hr +0.3
msc 3hr_MSC_rep2_lowinoculum +0.3
stress Phosphomycin 0.001 mg/ml +0.3
phage RB68 +0.3
control PBS_cage_2_mouse_2_Cecum_40 hr +0.3
phage Ste41 +0.4
phage Ste41 +0.4
phage RB68 +0.5
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b3595