Fitness for 1 genes in Escherichia coli BW25113

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Group Condition b2383
ypdD
phage T7_phage 0.00015625 MOI TC4 -0.5
control PBS_cage_1_mice _Feces_22 hr -0.4
control PBS_cage_2_mouse_1_Cecum_40 hr -0.3
control PBS_cage_1_mice _Feces_16 hr -0.3
phage T7_phage 0.0015625 MOI TC1 -0.3
control PBS_cage_1_mice _Feces_40 hr -0.3
stress LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.00000015625 mM -0.3
phage RB68 +0.3
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan +0.3
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.3
msc 22hr_MSC_rep1_highinoculum +0.3
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.3
retron_ec_48_control retron_Ec_48_control +0.3
carbon source carbon source D-Mannose 20mM +0.3
motility outer cut, LB soft agar motility assay +0.3
stress Ciprofloxacin Hydrochloride 0.000156 mM +0.3
carbon source carbon source D-Glucose 0.25mM +0.3
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:10 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan +0.3
gfp_control GFP_control +0.3
motility outer cut, LB soft agar motility assay +0.3
phage Ste41 +0.3
phage R1_N4_T2_phage8 +0.3
dart Outgrowth from conjugation with pRH23 in LB+Gent50 +0.3
stress 2-nitrobenzenesulfonyl fluoride +0.3
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.4
phage N4_phage 0.009375 MOI TC1 +0.4
carbon source carbon source D-Mannose 1mM +0.4
stress Benzalkonium Chloride 0.004 mg/ml +0.4
stress Cisplatin 0.1 mg/ml +0.4
phage Papa dilution 10-1 cacl2 maltose +0.6
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b2383