Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS18450 and RPSI07_RS18455 are separated by 11 nucleotidesRPSI07_RS18455 and RPSI07_RS25170 are separated by 226 nucleotidesRPSI07_RS25170 and RPSI07_RS18460 are separated by 135 nucleotidesRPSI07_RS18460 and RPSI07_RS18465 are separated by 34 nucleotides RPSI07_RS18450: RPSI07_RS18450 - peptidylprolyl isomerase, at 2,342,075 to 2,342,599 _RS18450 RPSI07_RS18455: RPSI07_RS18455 - cupin domain-containing protein, at 2,342,611 to 2,343,840 _RS18455 RPSI07_RS25170: RPSI07_RS25170 - hypothetical protein, at 2,344,067 to 2,344,339 _RS25170 RPSI07_RS18460: RPSI07_RS18460 - hypothetical protein, at 2,344,475 to 2,345,260 _RS18460 RPSI07_RS18465: RPSI07_RS18465 - outer membrane protein assembly factor BamC, at 2,345,295 to 2,346,491 _RS18465
Group Condition RPSI07_RS18450 RPSI07_RS18455 RPSI07_RS25170 RPSI07_RS18460 RPSI07_RS18465
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -2.7 -1.0 N.D. -0.2 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.4 +0.2 N.D. -0.5 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.8 -2.7 N.D. -0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.6 -1.6 N.D. -0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.3 -0.3 N.D. -0.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.7 -2.2 N.D. -0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -1.3 -1.3 N.D. -0.1 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.6 -1.9 N.D. -0.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.7 -1.5 N.D. -0.3 N.D.
smsa no antibiotic control SMSA no antibiotic control -2.0 -0.3 N.D. -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.7 -1.0 N.D. +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix -1.8 -0.4 N.D. -0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.2 -1.1 N.D. +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 -0.9 N.D. +0.4 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.4 -1.1 N.D. +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.2 -1.3 N.D. -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 -0.5 N.D. +0.2 N.D.
cpg no stress control CPG no stress control -1.1 -0.7 N.D. +0.3 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.3 +0.2 N.D. -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -0.9 N.D. +0.5 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.9 +0.9 N.D. -0.4 N.D.
cpg CPG -0.3 -1.4 N.D. +0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -2.1 N.D. +0.8 N.D.
m63_quarter_strength M63_quarter_strength -1.9 +0.7 N.D. +0.2 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +1.0 -1.8 N.D. +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.7 +1.9 N.D. -0.2 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.5 +2.3 N.D. +0.2 N.D.
m63_quarter_strength M63_quarter_strength -1.0 +2.1 N.D. +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.7 +2.1 N.D. -0.1 N.D.
m63_quarter_strength M63_quarter_strength -0.0 +2.9 N.D. +0.4 N.D.
remove
RPSI07_RS18450
plot		 remove
RPSI07_RS18455
plot		 remove
RPSI07_RS25170		 remove
RPSI07_RS18460
plot		 remove
RPSI07_RS18465
plot