Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS09320 and RPSI07_RS09325 are separated by 116 nucleotidesRPSI07_RS09325 and RPSI07_RS24895 overlap by 95 nucleotidesRPSI07_RS24895 and RPSI07_RS09330 are separated by 614 nucleotidesRPSI07_RS09330 and RPSI07_RS09335 are separated by 257 nucleotides RPSI07_RS09320: RPSI07_RS09320 - hypothetical protein, at 312,553 to 312,813 _RS09320 RPSI07_RS09325: RPSI07_RS09325 - lipid A biosynthesis lauroyl acyltransferase, at 312,930 to 313,997 _RS09325 RPSI07_RS24895: RPSI07_RS24895 - hypothetical protein, at 313,903 to 314,178 _RS24895 RPSI07_RS09330: RPSI07_RS09330 - exo-poly-galacturonase signal peptide protein, at 314,793 to 316,907 _RS09330 RPSI07_RS09335: RPSI07_RS09335 - tryptophan 2-monooxygenase oxidoreductase, at 317,165 to 319,288 _RS09335
Group Condition RPSI07_RS09320 RPSI07_RS09325 RPSI07_RS24895 RPSI07_RS09330 RPSI07_RS09335
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.3 -2.6 +0.1 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.4 -2.2 +0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 +0.1 -1.2 -0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.2 -1.1 -0.0 +0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 +0.1 -1.5 -0.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 -1.6 +0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.2 -0.1 -1.1 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 +0.1 -1.1 -0.1 -0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.0 -0.8 -0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 -0.0 -0.9 -0.0 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.1 -1.0 +0.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.1 -1.1 +0.0 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 +0.2 -1.2 -0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.1 -0.8 +0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.2 +0.0 -0.9 +0.0 -0.0
m63_quarter_strength M63_quarter_strength -0.2 +0.3 -0.7 -0.0 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 +0.1 -0.9 +0.0 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.4 +0.0 -1.0 -0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.1 -0.7 +0.1 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.0 -0.7 -0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix +0.3 +0.1 -0.5 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.2 +0.2 -0.5 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 +0.4 -0.8 -0.0 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.5 +0.2 -0.7 +0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 -0.6 +0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.3 -0.8 -0.0 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.4 -0.1 +0.9 +0.0 -0.1
smsa no antibiotic control SMSA no antibiotic control +0.1 +0.1 +0.6 +0.2 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.4 +1.6 +0.2 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 -0.3 +1.5 +0.0 -0.0
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RPSI07_RS09320
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RPSI07_RS09325
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RPSI07_RS09330
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RPSI07_RS09335
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