Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS06565 and RPSI07_RS06570 are separated by 180 nucleotidesRPSI07_RS06570 and RPSI07_RS24635 are separated by 202 nucleotidesRPSI07_RS24635 and RPSI07_RS24640 overlap by 51 nucleotidesRPSI07_RS24640 and RPSI07_RS06575 are separated by 409 nucleotides RPSI07_RS06565: RPSI07_RS06565 - class I SAM-dependent methyltransferase, at 1,765,081 to 1,765,713 _RS06565 RPSI07_RS06570: RPSI07_RS06570 - DUF2939 domain-containing protein, at 1,765,894 to 1,766,493 _RS06570 RPSI07_RS24635: RPSI07_RS24635 - hypothetical protein, at 1,766,696 to 1,767,103 _RS24635 RPSI07_RS24640: RPSI07_RS24640 - hypothetical protein, at 1,767,053 to 1,767,445 _RS24640 RPSI07_RS06575: RPSI07_RS06575 - dihydrofolate reductase, at 1,767,855 to 1,768,517 _RS06575
Group Condition RPSI07_RS06565 RPSI07_RS06570 RPSI07_RS24635 RPSI07_RS24640 RPSI07_RS06575
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.2 -0.0 -0.6 -0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.1 +0.2 -0.6 -0.3 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.3 -0.2 -0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 +0.0 -0.5 -0.3 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.2 -0.1 -0.3 -0.3 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.1 +0.0 -0.4 -0.3 -0.1
cpg CPG -0.1 -0.1 -0.3 -0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.0 -0.6 -0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.1 -0.3 -0.4 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.0 +0.2 -0.3 -0.4 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.1 +0.4 -0.6 -0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.0 +0.1 -0.4 -0.4 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.0 +0.2 -0.3 -0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix -0.1 +0.2 -0.1 -0.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.0 +0.1 +0.5 -0.1 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.1 -0.2 +0.4 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.1 +0.3 -0.3 -0.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.2 -0.0 -0.2 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.0 -0.3 -0.0 +0.3 +0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.0 -0.2 +0.3 +0.2 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.1 +0.5 -0.1 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 -0.1 +0.3 +0.1 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -0.1 +0.2 +0.2 +0.4
m63_quarter_strength M63_quarter_strength -0.1 -0.1 +0.2 +0.3 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 +0.3 +0.1 +0.4 -0.2
cpg no stress control CPG no stress control +0.0 +0.1 +0.5 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.0 +0.3 +0.3 +0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.2 +0.2 +0.4 +0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 +0.2 +0.4 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix +0.2 +0.2 +0.3 +0.6 +0.1
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