Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS23235 and RPSI07_RS23240 are separated by 73 nucleotidesRPSI07_RS23240 and RPSI07_RS23245 are separated by 112 nucleotidesRPSI07_RS23245 and RPSI07_RS23250 are separated by 28 nucleotidesRPSI07_RS23250 and RPSI07_RS23255 are separated by 98 nucleotides RPSI07_RS23235: RPSI07_RS23235 - ABC transporter permease, at 3,361,169 to 3,362,098 _RS23235 RPSI07_RS23240: RPSI07_RS23240 - nitroreductase, at 3,362,172 to 3,362,771 _RS23240 RPSI07_RS23245: RPSI07_RS23245 - MarR family transcriptional regulator, at 3,362,884 to 3,363,396 _RS23245 RPSI07_RS23250: RPSI07_RS23250 - hypothetical protein, at 3,363,425 to 3,364,033 _RS23250 RPSI07_RS23255: RPSI07_RS23255 - hypothetical protein, at 3,364,132 to 3,364,506 _RS23255
Group Condition RPSI07_RS23235 RPSI07_RS23240 RPSI07_RS23245 RPSI07_RS23250 RPSI07_RS23255
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.3 +0.4 N.D. -1.0 N.D.
cpg CPG -1.6 -0.5 N.D. +0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 +0.3 N.D. -1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -2.3 +0.2 N.D. +0.1 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -1.6 -0.2 N.D. -0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -1.8 +0.4 N.D. +0.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.9 +0.3 N.D. +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.7 +0.1 N.D. +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 -0.3 N.D. +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 +0.2 N.D. -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.0 -0.2 N.D. +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 -0.3 N.D. +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 +0.1 N.D. +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.5 +0.5 N.D. +0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.0 +0.4 N.D. +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 +0.5 N.D. +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 +0.4 N.D. +0.7 N.D.
smsa no antibiotic control SMSA no antibiotic control +0.9 -0.4 N.D. +0.1 N.D.
cpg no stress control CPG no stress control +1.0 -0.6 N.D. +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +1.0 -0.3 N.D. +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.9 -0.2 N.D. +0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.8 +0.5 N.D. -0.4 N.D.
cpg CPG +0.7 -0.1 N.D. +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.0 -0.1 N.D. +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +1.3 +0.0 N.D. -0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.8 +0.4 N.D. -0.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.9 -0.1 N.D. +0.3 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +1.5 +0.2 N.D. +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +1.2 +0.6 N.D. +0.4 N.D.
m63_quarter_strength M63_quarter_strength +2.9 -0.1 N.D. +0.1 N.D.
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RPSI07_RS23235
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RPSI07_RS23240
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RPSI07_RS23255
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