Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS23050 and RPSI07_RS23055 are separated by 58 nucleotidesRPSI07_RS23055 and RPSI07_RS23060 are separated by 151 nucleotidesRPSI07_RS23060 and RPSI07_RS23065 are separated by 33 nucleotidesRPSI07_RS23065 and RPSI07_RS23070 are separated by 103 nucleotides RPSI07_RS23050: RPSI07_RS23050 - sigma 54-dependent transcriptional regulator, at 3,318,083 to 3,319,690 _RS23050 RPSI07_RS23055: RPSI07_RS23055 - patatin-like phospholipase, at 3,319,749 to 3,320,660 _RS23055 RPSI07_RS23060: RPSI07_RS23060 - cupin domain-containing protein, at 3,320,812 to 3,321,282 _RS23060 RPSI07_RS23065: RPSI07_RS23065 - acylphosphatase, at 3,321,316 to 3,321,690 _RS23065 RPSI07_RS23070: RPSI07_RS23070 - DUF4430 domain-containing protein, at 3,321,794 to 3,322,237 _RS23070
Group Condition RPSI07_RS23050 RPSI07_RS23055 RPSI07_RS23060 RPSI07_RS23065 RPSI07_RS23070
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 -0.9 +0.0 -1.6 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.1 +0.4 -2.8 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 -0.1 +0.8 -2.6 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 +0.1 +0.2 -1.2 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 +0.0 +0.0 -1.7 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 +0.4 +0.4 -1.7 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 +0.5 -0.1 -1.5 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.2 -0.6 -1.0 +0.1
m63_quarter_strength M63_quarter_strength -0.2 +0.1 +0.4 -1.6 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.0 -0.6 +0.8 -1.7 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.9 -0.4 -2.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix -0.3 +0.6 -0.1 -1.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 +0.1 +0.4 -1.4 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +2.0 -0.1 -3.7 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.5 +0.6 +0.1 -1.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.8 -0.4 -1.5 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.5 -0.5 -1.0 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.3 +0.6 +0.0 -1.0 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.3 +0.8 -0.2 -0.9 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.3 +1.1 -0.1 -1.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.4 +0.1 +0.5 -1.7 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.6 +0.3 -0.1 -0.9 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +2.0 -0.3 -1.9 +0.3
cpg CPG +0.5 +0.6 -0.1 -1.0 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.5 +0.6 +0.3 -1.0 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.1 -0.5 -0.4 +1.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.6 +0.6 -0.7 -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.6 +0.5 +0.1 -0.6 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.2 +0.9 +0.1 -0.2 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.5 +0.7 +0.1 +0.6 -0.3
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