Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS22975 and RPSI07_RS22980 overlap by 11 nucleotidesRPSI07_RS22980 and RPSI07_RS22985 are separated by 159 nucleotidesRPSI07_RS22985 and RPSI07_RS22990 are separated by 389 nucleotidesRPSI07_RS22990 and RPSI07_RS22995 are separated by 159 nucleotides RPSI07_RS22975: RPSI07_RS22975 - amidohydrolase, at 3,300,356 to 3,302,194 _RS22975 RPSI07_RS22980: RPSI07_RS22980 - DUF1275 domain-containing protein, at 3,302,184 to 3,302,897 _RS22980 RPSI07_RS22985: RPSI07_RS22985 - methylmalonyl-CoA mutase, at 3,303,057 to 3,306,356 _RS22985 RPSI07_RS22990: RPSI07_RS22990 - hypothetical protein, at 3,306,746 to 3,307,813 _RS22990 RPSI07_RS22995: RPSI07_RS22995 - DUF427 domain-containing protein, at 3,307,973 to 3,308,329 _RS22995
Group Condition RPSI07_RS22975 RPSI07_RS22980 RPSI07_RS22985 RPSI07_RS22990 RPSI07_RS22995
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 -1.0 -0.1 +0.2 +0.3
smsa no antibiotic control SMSA no antibiotic control +0.2 -0.6 -0.0 +0.6 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.5 +0.2 +0.7 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.1 -0.5 +0.1 +0.9 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.2 -0.5 +0.1 +0.6 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.4 -0.2 -0.1 +0.5 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.1 +1.0 +0.1 +0.1 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 +1.0 +0.1 +0.3 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.0 +1.0 +0.0 +0.5 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.4 -0.1 +0.1 +0.6 +0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.0 +0.5 +0.2 +0.8 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.4 -0.0 +0.1 +0.8 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -1.6 +0.1 +2.7 +0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 +0.9 +0.1 +0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.7 +0.0 +2.0 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.1 +0.9 -0.0 +0.6 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.2 +0.0 +1.9 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.1 +0.2 +1.5 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 -0.4 +0.3 +1.7 -0.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 -0.0 +0.4 +1.3 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.3 +0.2 +1.5 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.0 +0.0 +1.9 +0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.7 +0.2 +2.3 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.2 +0.2 +2.0 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.3 +0.2 +1.9 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.4 +0.1 +1.9 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 +0.1 +0.5 +1.7 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +0.5 +0.3 +2.0 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 +0.4 +2.4 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.0 +0.2 +2.9 +0.3
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RPSI07_RS22975
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RPSI07_RS22980
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RPSI07_RS22990
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RPSI07_RS22995
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