Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS22820 and RPSI07_RS22825 overlap by 4 nucleotidesRPSI07_RS22825 and RPSI07_RS22830 overlap by 4 nucleotidesRPSI07_RS22830 and RPSI07_RS22835 are separated by 19 nucleotidesRPSI07_RS22835 and RPSI07_RS22840 are separated by 33 nucleotides RPSI07_RS22820: RPSI07_RS22820 - rhodanese-like domain-containing protein, at 3,268,110 to 3,268,520 _RS22820 RPSI07_RS22825: RPSI07_RS22825 - HAD family phosphatase, at 3,268,517 to 3,269,206 _RS22825 RPSI07_RS22830: RPSI07_RS22830 - hypothetical protein, at 3,269,203 to 3,269,637 _RS22830 RPSI07_RS22835: RPSI07_RS22835 - methylcrotonoyl-CoA carboxylase, at 3,269,657 to 3,271,264 _RS22835 RPSI07_RS22840: RPSI07_RS22840 - dienelactone hydrolase family protein, at 3,271,298 to 3,272,215 _RS22840
Group Condition RPSI07_RS22820 RPSI07_RS22825 RPSI07_RS22830 RPSI07_RS22835 RPSI07_RS22840
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -1.0 -0.8 +0.1 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.1 -0.4 -0.4 -0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -2.2 +0.1 +0.0 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -2.2 +0.0 +0.1 -0.2
smsa no antibiotic control SMSA no antibiotic control N.D. -1.1 -0.6 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. -2.1 +0.2 +0.2 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -1.2 -0.9 +0.4 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -0.9 -0.6 +0.1 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -1.2 -0.2 +0.8 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.4 -0.1 -0.0 +0.6
m63_quarter_strength M63_quarter_strength N.D. +1.4 -0.8 +0.1 -0.2
m63_quarter_strength M63_quarter_strength N.D. +1.1 -0.4 -0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. +0.9 +0.3 -0.5 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +1.5 -0.1 -0.1 -0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. +1.7 -0.4 -0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +1.6 +0.3 -0.6 -0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.9 -0.3 +0.6 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +1.4 -0.1 -0.2 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +1.8 -0.3 -0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +1.2 +0.5 -0.3 +0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +1.4 -0.1 -0.0 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +1.0 +0.8 -0.2 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +2.1 +0.4 -0.7 +0.2
smsa no antibiotic control SMSA no antibiotic control N.D. +2.4 +0.5 -0.7 -0.2
stress SMSA with Ralstonia_antibiotic_mix N.D. +2.0 +0.4 -0.2 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +2.0 +0.8 -0.4 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +2.2 +0.6 -0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. +2.4 +0.7 -0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +2.5 +0.2 +0.2 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +2.9 +0.6 -0.3 +0.3
remove
RPSI07_RS22820
plot		 remove
RPSI07_RS22825
plot		 remove
RPSI07_RS22830		 remove
RPSI07_RS22835
plot		 remove
RPSI07_RS22840
plot