Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS22525 and RPSI07_RS22530 are separated by 100 nucleotidesRPSI07_RS22530 and RPSI07_RS22535 are separated by 419 nucleotidesRPSI07_RS22535 and RPSI07_RS22540 are separated by 21 nucleotidesRPSI07_RS22540 and RPSI07_RS22545 are separated by 83 nucleotides RPSI07_RS22525: RPSI07_RS22525 - sensor histidine kinase, at 3,207,310 to 3,209,307 _RS22525 RPSI07_RS22530: RPSI07_RS22530 - dicarboxylate/amino acid:cation symporter, at 3,209,408 to 3,210,694 _RS22530 RPSI07_RS22535: RPSI07_RS22535 - ferredoxin, at 3,211,114 to 3,211,440 _RS22535 RPSI07_RS22540: RPSI07_RS22540 - alpha/beta hydrolase, at 3,211,462 to 3,212,109 _RS22540 RPSI07_RS22545: RPSI07_RS22545 - D-alanyl-D-alanine carboxypeptidase, at 3,212,193 to 3,213,386 _RS22545
Group Condition RPSI07_RS22525 RPSI07_RS22530 RPSI07_RS22535 RPSI07_RS22540 RPSI07_RS22545
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.3 -0.5 -1.7 N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.0 -1.2 -1.4 N.D. +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -1.5 -1.0 N.D. +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 -1.3 -0.1 N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -1.5 -0.1 N.D. -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.9 -0.7 N.D. +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 -0.7 -0.5 N.D. +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.7 -0.4 N.D. -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.6 -0.5 N.D. +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 -0.7 -0.4 N.D. +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -0.7 -0.4 N.D. -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 -1.3 +0.6 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix -0.1 -0.3 -1.0 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.0 -0.5 -0.7 N.D. -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -0.3 -0.1 N.D. +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 -0.8 +0.4 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.2 -0.4 -0.9 N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.0 -0.4 -0.7 N.D. -0.3
smsa no antibiotic control SMSA no antibiotic control +0.0 -0.4 -0.6 N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 -0.1 -0.8 N.D. -0.4
m63_quarter_strength M63_quarter_strength -0.1 +0.2 -0.5 N.D. -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.9 +1.1 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix -0.5 +0.1 +0.6 N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -0.8 +1.1 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.4 -0.0 -0.6 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 -0.0 +0.9 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.3 +0.0 +1.6 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.1 -0.4 +2.2 N.D. -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.0 +0.3 +0.7 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.4 +0.1 +1.8 N.D. +0.2
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RPSI07_RS22525
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RPSI07_RS22530
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RPSI07_RS22540
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RPSI07_RS22545
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