Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS22515 and RPSI07_RS22520 are separated by 73 nucleotidesRPSI07_RS22520 and RPSI07_RS22525 are separated by 25 nucleotidesRPSI07_RS22525 and RPSI07_RS22530 are separated by 100 nucleotidesRPSI07_RS22530 and RPSI07_RS22535 are separated by 419 nucleotides RPSI07_RS22515: RPSI07_RS22515 - membrane protein, at 3,205,340 to 3,205,894 _RS22515 RPSI07_RS22520: RPSI07_RS22520 - sigma-54-dependent Fis family transcriptional regulator, at 3,205,968 to 3,207,284 _RS22520 RPSI07_RS22525: RPSI07_RS22525 - sensor histidine kinase, at 3,207,310 to 3,209,307 _RS22525 RPSI07_RS22530: RPSI07_RS22530 - dicarboxylate/amino acid:cation symporter, at 3,209,408 to 3,210,694 _RS22530 RPSI07_RS22535: RPSI07_RS22535 - ferredoxin, at 3,211,114 to 3,211,440 _RS22535
Group Condition RPSI07_RS22515 RPSI07_RS22520 RPSI07_RS22525 RPSI07_RS22530 RPSI07_RS22535
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 -1.1 -0.7 -0.7 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.5 -1.2 -0.8 -0.9 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 -0.5 -1.0 -1.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -1.1 -0.7 -1.5 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.5 -1.0 -1.2 -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.4 -0.8 -0.8 -0.9 +1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -0.7 -0.7 -1.5 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.3 -0.5 -0.8 -0.7 -0.4
stress SMSA with Ralstonia_antibiotic_mix -2.0 -0.0 -0.1 -0.3 -1.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.9 -0.6 -0.7 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -2.1 -0.1 -0.0 -0.3 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 -0.8 -0.8 -0.8 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.0 -0.7 -0.9 -1.3 +0.6
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 -0.4 -1.3 -0.5 -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 -0.5 -0.6 -0.6 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.3 -0.4 -0.6 -0.8 +1.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 -0.4 -1.0 -0.7 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -2.1 +0.0 +0.2 -0.1 -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -2.4 -0.0 -0.0 -0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -1.6 +0.2 +0.2 -0.4 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.6 +0.2 -0.0 -0.5 -0.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -2.3 +0.3 +0.0 +0.1 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.6 +0.1 +0.1 -0.1 -0.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.4 +0.3 +0.2 +0.1 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -2.0 +0.4 +0.4 -0.0 -0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -2.2 +0.3 +0.0 +0.3 -0.2
smsa no antibiotic control SMSA no antibiotic control -1.4 +0.7 +0.0 -0.4 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.8 +0.3 -0.3 +0.0 +1.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.8 +1.3 -0.1 -0.4 +2.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.5 +0.3 -0.4 +0.1 +1.8
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RPSI07_RS22515
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RPSI07_RS22520
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RPSI07_RS22530
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RPSI07_RS22535
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