Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS22510 and RPSI07_RS22515 are separated by 94 nucleotidesRPSI07_RS22515 and RPSI07_RS22520 are separated by 73 nucleotidesRPSI07_RS22520 and RPSI07_RS22525 are separated by 25 nucleotidesRPSI07_RS22525 and RPSI07_RS22530 are separated by 100 nucleotides RPSI07_RS22510: RPSI07_RS22510 - O-acetyl-ADP-ribose deacetylase, at 3,204,730 to 3,205,245 _RS22510 RPSI07_RS22515: RPSI07_RS22515 - membrane protein, at 3,205,340 to 3,205,894 _RS22515 RPSI07_RS22520: RPSI07_RS22520 - sigma-54-dependent Fis family transcriptional regulator, at 3,205,968 to 3,207,284 _RS22520 RPSI07_RS22525: RPSI07_RS22525 - sensor histidine kinase, at 3,207,310 to 3,209,307 _RS22525 RPSI07_RS22530: RPSI07_RS22530 - dicarboxylate/amino acid:cation symporter, at 3,209,408 to 3,210,694 _RS22530
Group Condition RPSI07_RS22510 RPSI07_RS22515 RPSI07_RS22520 RPSI07_RS22525 RPSI07_RS22530
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -2.0 -0.5 -1.0 -1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -2.4 -0.8 -0.8 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -2.2 -1.1 -0.7 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -2.3 -0.4 -0.6 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -1.5 -1.2 -0.8 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -1.0 -0.7 -0.9 -1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.9 -0.7 -0.7 -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.4 -1.1 -0.7 -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -1.3 -0.5 -0.8 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -1.2 -0.8 -0.8 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.3 -0.5 -1.0 -1.2
stress SMSA with Ralstonia_antibiotic_mix -0.3 -2.0 -0.0 -0.1 -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.7 -0.9 -0.6 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.0 -2.1 -0.1 -0.0 -0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 -0.4 -0.4 -1.0 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.2 -2.4 -0.0 -0.0 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.8 -0.5 -0.6 -0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 -2.3 +0.3 +0.0 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 -1.6 +0.2 +0.2 -0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.3 -0.4 -1.1 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.3 -1.6 +0.2 -0.0 -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 -2.4 +0.3 +0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.4 -2.1 +0.0 +0.2 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.1 -2.2 +0.3 +0.0 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.2 -2.0 +0.4 +0.4 -0.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.9 -0.4 -1.3 -0.5
smsa no antibiotic control SMSA no antibiotic control -0.0 -1.4 +0.7 +0.0 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.0 -1.8 +1.3 -0.1 -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 -1.7 +0.3 +0.2 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 -1.5 +0.2 +0.2 +0.1
remove
RPSI07_RS22510
plot		 remove
RPSI07_RS22515
plot		 remove
RPSI07_RS22520		 remove
RPSI07_RS22525
plot		 remove
RPSI07_RS22530
plot